primitives

Fundamental data structures used throughout PhyloZoo.

This submodule provides the underlying graph and set-theoretic structures that support the higher-level phylogenetic network classes: Partition, CircularOrdering, DirectedMultiGraph, and MixedMultiGraph.

• partition
  • Partition
• circular_ordering
  • CircularOrdering
  • CircularSetOrdering
• d_multigraph
  • Main Class
  • Features
  • Transformations
  • Conversions
  • Isomorphism
  • I/O
• m_multigraph
  • Main Class
  • Features
  • Transformations
  • Conversions
  • Isomorphism
  • I/O