Squirrel pipeline
=================

The main Squirrel pipeline and the delta heuristic for inferring quartet
profiles from distances, plus the scoring functions for evaluating networks.

squirrel
--------

.. automodule:: physquirrel.algorithms.squirrel
   :members:
   :exclude-members: _process_contracted_tree

delta_heuristic
---------------

.. automodule:: physquirrel.algorithms.delta_heuristic
   :members: